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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942260.1_cds_XP_016485787.1_76678
CDS Infomation

[gene=LOC107806186] [db_xref=GeneID:107806186] [protein=metacaspase-1-like] [protein_id=XP_016485787.1] [location=join(11689..11983,13682..14012,14605..14725,14834..15040,15137..15196)] [gbkey=CDS]
Sequence

ATGGACTGTACTAACTGCCATACAACCTTACAAATCCCAAATGGTGCTCAATCCATTCGC
TGTGCCGTCTGCCATGCAGTTAGTCGCATTGGCAGCCGGCTACAGCTACTAGCCAACAAG
TACCATTATCCTCAACTCCTTTCGCCTTTTGGCCGAAAGAGAGCTGTGGTTATTGGTATT
GCGTATAAAAATACTGACGATGAGCTCGTGGGTTGTATCAATGATGCCAAATGTATGAAG
TACTTGCTTGTCAATCGATTCAATTTCCCTCAAGACTCCATTCTCATGCTCACTGAAGAA
GAAAGAGATAAAAAGAGGATGCCAACTAAACATAATATAATAAAGGCAATGTCCTGGCTT
ATGCAAGGAGTTAAAGCAGGGGATTCTCTGGTATTTCATTTTTCTGGTCATGGTTCACAG
CAAGAGAATGACACTGGAGATGAAATTGATGGTTACGACGAAACACTTTGCCCATTGGAT
TATGAAAAACAAGGAGAGATTGTTGATGATGAACTAAATGCAATACTCGTCAAACCTCTT
CCTCCTGGTGCGAAGCTTCATGCCATAATAGATGCTTGTCACAGTGGCACTATGCTTGAT
TTGCCGTTCCTTTGTAGGACGGGCAGAACTGGACGATATGTATGGGAAGATCATCGTCCT
CTATCAGGAGCATGGAAAGGAACAAATGGAGGAGAGGTTATATCCTTCAGTGGTTGCGAT
GATCATCAAAACTCTAAAGAAACAGAAAATTTGTCCAAGGTTACTTCAACTGGTGCAATG
ACTTTTTCTTTCATACAAGCAATTGAACGCGGACAAGGAACAACATATGGAAGTATTCTA
AATGCAATGAGAACTTCAATCCGCAGATCTGATAGTGATTTAGGAGGAAAAATTGTTACA
ACTCTTCTCACAATGCTAATAAATGGAGGAAGCCTTGGCAGTGGGGAAAGACAGGAGCCC
CAGTTAACTGCGAATGAGCCATTTGATGTGTACACCAAGCCGTTTTCGTTATAG

Peptide Sequence

PEP ID

XP_016485787.1
PEP Infomation

PREDICTED: metacaspase-1-like [Nicotiana tabacum]
Sequence

MDCTNCHTTLQIPNGAQSIRCAVCHAVSRIGSRLQLLANKYHYPQLLSPFGRKRAVVIGI
AYKNTDDELVGCINDAKCMKYLLVNRFNFPQDSILMLTEEERDKKRMPTKHNIIKAMSWL
MQGVKAGDSLVFHFSGHGSQQENDTGDEIDGYDETLCPLDYEKQGEIVDDELNAILVKPL
PPGAKLHAIIDACHSGTMLDLPFLCRTGRTGRYVWEDHRPLSGAWKGTNGGEVISFSGCD
DHQNSKETENLSKVTSTGAMTFSFIQAIERGQGTTYGSILNAMRTSIRRSDSDLGGKIVT
TLLTMLINGGSLGSGERQEPQLTANEPFDVYTKPFSL

Transcript Sequence

Gene sequence data has not been registered.